Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC0724Sugar ABC transporter substrate-binding protein. (557 aa)    
Predicted Functional Partners:
ABC0728
Polysaccharide ABC transporter permease.
 
   0.947
ABC0727
Polysaccharide ABC transporter permease.
 
    0.900
ABC1136
Polysaccharide ABC transporter permease.
  
   0.798
ABC3118
Sugar ABC transporter permease.
  
   0.765
ABC1135
Polysaccharide ABC transporter permease.
 
    0.761
ABC0362
Polysaccharide ABC transporter permease.
  
   0.752
ABC1146
Sugar ABC transporter permease.
  
   0.752
ABC1137
Polysaccharide ABC transporter substrate-binding protein.
  
     0.751
ABC0725
Two-component sensor histidine kinase.
 
     0.741
ABC0358
Conserved hypothetical protein.
  
     0.739
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.