STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0752Minor extracellular serine protease; Belongs to the peptidase S8 family. (851 aa)    
Predicted Functional Partners:
sipW
Signal peptidase I.
     
 0.632
ABC0754
Conserved hypothetical protein.
       0.628
mntA
Mn2+/Zn2+ ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
   
  
 0.500
mntB
Mn2+/Zn2+ ABC transporter ATP-binding protein.
   
  
 0.486
ABC0751
Histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
  
    0.449
cspC
Cold shock protein CspC.
     
 0.433
sigD
DNA-directed RNA polymerase sigma-28 factor sigma-D; Belongs to the sigma-70 factor family.
   
  
 0.418
ABC3268
Conserved hypothetical protein.
 
 
 0.405
ABC0333
Conserved hypothetical protein.
 
 
 0.400
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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