STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0764Amino acid transporter. (463 aa)    
Predicted Functional Partners:
ABC0372
Amino acid transporter.
  
     0.670
ABC1184
Proline-specific permease.
 
  
 0.586
ABC0765
Thiosulfate sulfurtransferase.
       0.554
treA
Trehalose-6-phosphate hydrolase.
   
 0.551
ABC1611
Alpha-amylase.
   
 0.551
ABC4031
Maltogenic amylase.
   
 0.551
ABC0763
L-alanoyl-D-glutamate peptidase.
       0.527
gltA
Glutamate synthase large subunit.
  
  
 0.521
ABC1010
Monovalent cation:H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
 
 
 
 0.519
ABC0357
Major facilitator (MFS) superfamily protein.
  
 
 
 0.494
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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