STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppEDipeptide ABC transporter substrate-binding protein. (548 aa)    
Predicted Functional Partners:
dppB
Dipeptide ABC transporter permease.
 
 0.992
dppC
Dipeptide ABC transporter permease.
 
 0.991
dppD
Dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.983
ABC0783
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.866
dppA
D-alanyl-aminopeptidase.
 
  
 0.830
ABC0782
Cell wall-associated hydrolase.
 
    0.788
ABC0781
Muramoyltetrapeptide carboxypeptidase.
 
  
 0.700
ABC1241
Oligopeptide ABC transporter permease.
  
 0.632
ABC4064
Oligopeptide ABC transporter permease.
  
 0.618
ABC1242
Oligopeptide ABC transporter permease.
  
 0.614
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.