STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0802Sulfatase; Belongs to the LTA synthase family. (627 aa)    
Predicted Functional Partners:
ABC3293
Phosphoglycerol transferase; Belongs to the LTA synthase family.
  
  
 
0.908
ABC3217
Phosphoglycerol transferase; Belongs to the LTA synthase family.
  
  
 
0.905
ABC2741
Adenine-specific methyltransferase.
  
     0.665
ABC2666
Conserved hypothetical protein.
  
     0.650
ABC2033
Conserved hypothetical protein.
  
     0.581
rasP
Zn-dependent protease; Is responsible for Site-2 cleavage of the RsiW anti-sigma factor. This results, after a third proteolytic step catalyzed by the ClpXP protease, in the release of SigW and the transcription activation of the genes under the control of the sigma-W factor (By similarity).
   
  
 0.571
secG
Preprotein translocase subunit G; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
  
 0.541
sipW
Signal peptidase I.
     
 0.524
sipV
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.524
ABC2526
Competence protein/transcription factor.
  
     0.517
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.