STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0808Conserved hypothetical protein. (63 aa)    
Predicted Functional Partners:
ABC0809
Growth inhibitor; Toxic component of a type II toxin-antitoxin (TA) system.
  
 
 0.972
ABC0806
Conserved hypothetical protein.
 
     0.815
ABC2370
Conserved hypothetical protein.
  
     0.773
rsfA
Prespore specific transcriptional activator RsfA.
  
     0.770
cotE
Spore coat protein E.
  
     0.763
gerD
Spore germination protein.
  
     0.756
ABC3039
Conserved hypothetical protein.
 
    0.739
ABC2497
Conserved hypothetical protein.
  
     0.722
ABC2951
Metalloendopeptidase.
  
     0.719
mecA
Negative regulator of genetic competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.
  
     0.717
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.