Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
arsRArsR family transcriptional regulator. (105 aa)    
Predicted Functional Partners:
ABC0834
Lactoylglutathione lyase.
  
  
 0.971
arsC
Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)].
 
  
 0.960
arsB
Arsenite efflux pump.
 
  
 0.886
ABC3390
ArsR family transcriptional regulator.
 
  
 0.847
ABC0836
Arsenic efflux pump; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
  
 0.652
ABC2444
Conserved hypothetical protein.
     
 0.624
ABC0833
Hypothetical protein.
       0.601
ABC0835
ArsR family transcriptional regulator.
 
    
0.581
abrB
Transition state regulatory protein.
      
 0.546
ABC0268
Cadmium efflux system accessory protein.
 
  
0.544
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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