STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0834Lactoylglutathione lyase. (123 aa)    
Predicted Functional Partners:
arsR
ArsR family transcriptional regulator.
  
  
 0.911
arsC
Arsenate reductase; Catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)].
  
  
 0.899
arsB
Arsenite efflux pump.
  
  
 0.830
ABC0835
ArsR family transcriptional regulator.
  
  
 0.824
ABC0833
Hypothetical protein.
       0.658
ABC0836
Arsenic efflux pump; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
       0.503
ABC3788
NADH-dependent flavin oxidoreductase.
  
    0.439
sdhC
Succinate dehydrogenase cytochrome b558 subunit.
   
  
 0.435
ABC0275
S-adenosylmethionine (SAM)-dependent methyltransferase.
  
 
   0.428
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.