STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0842Conserved hypothetical protein. (117 aa)    
Predicted Functional Partners:
ABC0843
ArsR family transcriptional regulator.
 
   
 0.791
ABC0844
Multidrug-efflux transporter.
 
     0.617
ABC0212
Conserved hypothetical protein.
  
     0.601
ABC1244
Conserved hypothetical protein.
 
   0.565
ABC3175
Conserved hypothetical protein.
  
     0.560
ABC1431
Phosphoglycerate mutase.
 
   0.559
ABC0211
GNAT family acetyltransferase.
  
     0.544
ABC3139
Conserved hypothetical protein.
  
     0.539
ABC4052
Hypothetical protein.
  
     0.500
ABC1482
Conserved hypothetical protein.
  
     0.495
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.