STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0887Conserved hypothetical protein; Belongs to the UPF0309 family. (246 aa)    
Predicted Functional Partners:
ABC0886
C component PTS system mannitol/fructose-specific enzyme II.
 
     0.861
ABC0885
B component PTS system mannitol/fructose-specific enzyme II.
 
     0.819
ABC0883
Conserved hypothetical protein.
 
    0.771
ABC0884
A component PTS system mannitol/fructose-specific enzyme II.
 
     0.697
ABC0857
BglG family transcriptional antiterminator.
 
     0.488
ABC0945
BglG family transcriptional antiterminator.
 
    0.459
ABC0946
Conserved hypothetical protein.
 
     0.424
licR
Transcriptional antiterminator of lichenan operon.
 
    0.401
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.