STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0910Amino acid ABC transporter substrate-binding protein. (277 aa)    
Predicted Functional Partners:
ABC0912
Amino acid ABC transporter permease.
 
 0.995
ABC0911
Amino acid ABC transporter permease.
 
 0.992
ABC0913
Amino acid ABC transporter ATP-binding protein.
 
 0.987
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.750
ABC0027
Glutamine ABC transporter permease.
 
 
 0.707
argH1
Argininosuccinate lyase.
  
  
 0.659
argH
Argininosuccinate lyase.
  
  
 0.659
ABC3489
L-proline 4-hydroxylase.
 
   
 0.627
ABC2931
Amino acid ABC transporter permease.
 
 
 0.587
ABC0028
Glutamine ABC transporter ATP-binding protein.
 
 
 0.542
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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