Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC0910Amino acid ABC transporter substrate-binding protein. (277 aa)    
Predicted Functional Partners:
ABC0912
Amino acid ABC transporter permease.
 
 0.997
ABC0911
Amino acid ABC transporter permease.
 
 0.995
ABC0913
Amino acid ABC transporter ATP-binding protein.
 
 0.987
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.802
ABC0027
Glutamine ABC transporter permease.
 
 
 0.761
argH1
Argininosuccinate lyase.
  
  
 0.683
argH
Argininosuccinate lyase.
  
  
 0.683
ABC3489
L-proline 4-hydroxylase.
 
   
 0.644
ABC2931
Amino acid ABC transporter permease.
 
 
 0.567
ectB
Diaminobutyrate--pyruvate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.565
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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