STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0913Amino acid ABC transporter ATP-binding protein. (273 aa)    
Predicted Functional Partners:
ABC0911
Amino acid ABC transporter permease.
 0.997
ABC0912
Amino acid ABC transporter permease.
 0.997
ABC0910
Amino acid ABC transporter substrate-binding protein.
 
 0.987
glnP
Glutamine ABC transporter permease.
 
 
 0.932
ABC2931
Amino acid ABC transporter permease.
 
 0.928
ABC0027
Glutamine ABC transporter permease.
 
 0.912
glnM
Glutamine ABC transporter permease.
 
 0.907
ABC0026
Glutamine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.862
glnH
Glutamine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.827
ABC2930
Amino acid ABC transporter substrate-binding protein.
 
 
 0.809
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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