STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpCPenicillin-binding protein 3. (685 aa)    
Predicted Functional Partners:
divIB
Cell division initiation protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
 
 0.731
cwlC
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.710
ABC3821
Stage V sporulation protein E; Belongs to the SEDS family.
 
 0.708
ABC2799
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.694
ABC2800
Stage V sporulation protein E; Belongs to the SEDS family.
 
 0.674
spoVE
Stage V sporulation protein E; Belongs to the SEDS family.
 
 0.663
ABC0930
Conserved hypothetical protein.
       0.581
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.569
murE-2
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
 0.557
mreB
Rod shape-determining protein MreB.
 
 
 0.551
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.