STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC0931Conserved hypothetical protein. (314 aa)    
Predicted Functional Partners:
ABC2408
Conserved hypothetical protein.
   
 
 0.741
ABC0824
Conserved hypothetical protein.
   
 
 0.729
ABC0932
Conserved hypothetical protein.
     
 0.577
ABC0934
Conserved hypothetical protein.
 
     0.496
ABC0935
Cysteine protease.
 
    0.487
ABC0198
Conserved hypothetical protein.
 
   
 0.471
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.423
ABC0933
Methanol dehydrogenase regulatory protein MoxR.
  
    0.421
ABC1977
Conserved hypothetical protein.
 
     0.418
ABC1562
Conserved hypothetical protein.
  
     0.414
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.