Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (276 aa)    
Predicted Functional Partners:
kduD
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.994
ABC1041
2-deoxy-D-gluconate 3-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.978
ABC1038
2-deoxy-D-gluconate 3-dehydrogenase.
 
 
 0.952
uxaC
Uronate isomerase.
 
   
 0.943
ABC1149
Conserved hypothetical protein.
 
   
 0.847
ABC3274
Unsaturated glucuronyl hydrolase.
 
   
 0.793
ABC2586
Phosphate transport system transcriptional regulator; Plays a role in the regulation of phosphate uptake.
   
    0.645
ABC1154
Altronate oxidoreductase.
 
   
 0.536
uxaB
Altronate oxidoreductase.
 
   
 0.533
rhaM
Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
 
   
 0.503
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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