STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1046Multidrug ABC transporter ATP-binding protein. (309 aa)    
Predicted Functional Partners:
ABC1047
Multidrug ABC transporter permease.
 
  
 0.945
ABC1048
Multidrug ABC transporter permease.
 
  
 0.945
ABC3186
Multidrug ABC transporter permease.
 
  
 0.853
ABC1435
Multidrug ABC transporter permease.
 
  
 0.677
ABC1436
Multidrug ABC transporter permease.
 
  
 0.658
ABC1044
Two-component sensor histidine kinase.
 
   
 0.643
ABC1481
Multidrug ABC transporter permease.
 
  
 0.595
ABC1461
Multidrug ABC transporter ATP-binding protein.
  
    0.591
ABC1045
Two-component response regulator.
 
    0.585
ABC1043
GNAT family acetyltransferase.
       0.466
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.