STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1048Multidrug ABC transporter permease. (352 aa)    
Predicted Functional Partners:
ABC1046
Multidrug ABC transporter ATP-binding protein.
 
  
 0.936
ABC1047
Multidrug ABC transporter permease.
 
   
0.857
ABC1434
Multidrug ABC transporter ATP-binding protein.
 
  
 0.757
ABC1044
Two-component sensor histidine kinase.
 
  
 0.712
ABC3186
Multidrug ABC transporter permease.
  
  
  0.643
ABC1045
Two-component response regulator.
 
   
 0.590
ABC0928
Nitroreductase.
  
  
 0.531
nfrA1
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.531
ABC3767
NAD(P)H nitroreductase.
  
  
 0.531
natA
Multidrug ABC transporter ATP-binding protein.
 
  
 0.517
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.