Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABC1048Multidrug ABC transporter permease. (352 aa)    
Predicted Functional Partners:
ABC1046
Multidrug ABC transporter ATP-binding protein.
 
  
 0.945
ABC1047
Multidrug ABC transporter permease.
 
   
0.859
ABC1434
Multidrug ABC transporter ATP-binding protein.
 
  
 0.789
ABC1044
Two-component sensor histidine kinase.
 
  
 0.733
ABC0928
Nitroreductase.
  
  
 0.641
nfrA1
Nitro/flavin reductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.641
ABC3767
NAD(P)H nitroreductase.
  
  
 0.641
ABC1045
Two-component response regulator.
 
   
 0.600
natA
Multidrug ABC transporter ATP-binding protein.
 
  
 0.580
ABC2121
Multidrug ABC transporter ATP-binding protein.
 
  
 0.562
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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