opuAA protein (Bacillus clausii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

opuAA

Glycine betaine ABC transporter ATP-binding protein. (405 aa)

Predicted Functional Partners:

opuAB

0.999

opuAC

0.998

ABC0982

0.994

ABC3417

0.994

ABC0066

0.879

ABC1070

0.605

opuD

0.577

treA

0.573

ABC1851

0.568

gbsB

0.529

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABC0066	opuAA	ABC0066	ABC1071	Conserved hypothetical protein.	Glycine betaine ABC transporter ATP-binding protein.	0.879
ABC0066	opuAB	ABC0066	ABC1072	Conserved hypothetical protein.	Glycine betaine ABC transporter permease.	0.711
ABC0982	ABC3417	ABC0982	ABC3417	Glycine betaine ABC transporter substrate-binding protein.	Proline/glycine betaine ABC transporter substrate-binding protein.	0.916
ABC0982	opuAA	ABC0982	ABC1071	Glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter ATP-binding protein.	0.994
ABC0982	opuAB	ABC0982	ABC1072	Glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter permease.	0.998
ABC0982	opuAC	ABC0982	ABC1073	Glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter substrate-binding protein.	0.915
ABC1070	opuAA	ABC1070	ABC1071	Transcriptional regulator; Belongs to the GbsR family.	Glycine betaine ABC transporter ATP-binding protein.	0.605
ABC1070	opuAB	ABC1070	ABC1072	Transcriptional regulator; Belongs to the GbsR family.	Glycine betaine ABC transporter permease.	0.580
ABC1070	opuAC	ABC1070	ABC1073	Transcriptional regulator; Belongs to the GbsR family.	Glycine betaine ABC transporter substrate-binding protein.	0.625
ABC1851	gbsB	ABC1851	ABC0979	Repressor protein.	Alcohol dehydrogenase.	0.534
ABC1851	opuAA	ABC1851	ABC1071	Repressor protein.	Glycine betaine ABC transporter ATP-binding protein.	0.568
ABC1851	opuAB	ABC1851	ABC1072	Repressor protein.	Glycine betaine ABC transporter permease.	0.523
ABC1851	opuD	ABC1851	ABC1626	Repressor protein.	Glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.	0.451
ABC1851	treA	ABC1851	ABC1264	Repressor protein.	Trehalose-6-phosphate hydrolase.	0.567
ABC3417	ABC0982	ABC3417	ABC0982	Proline/glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter substrate-binding protein.	0.916
ABC3417	opuAA	ABC3417	ABC1071	Proline/glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter ATP-binding protein.	0.994
ABC3417	opuAB	ABC3417	ABC1072	Proline/glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter permease.	0.998
ABC3417	opuAC	ABC3417	ABC1073	Proline/glycine betaine ABC transporter substrate-binding protein.	Glycine betaine ABC transporter substrate-binding protein.	0.924
gbsB	ABC1851	ABC0979	ABC1851	Alcohol dehydrogenase.	Repressor protein.	0.534
gbsB	opuAA	ABC0979	ABC1071	Alcohol dehydrogenase.	Glycine betaine ABC transporter ATP-binding protein.	0.529