STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1112Conserved hypothetical protein. (290 aa)    
Predicted Functional Partners:
ABC1113
Dihydrodipicolinate synthase; Belongs to the DapA family.
    
  0.970
ABC1110
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.969
ABC1114
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.957
ABC0470
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
ABC3014
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
ABC3810
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.908
ABC0577
Oxidoreductase.
  
     0.556
ABC1111
IclR family transcriptional regulator.
       0.469
ABC2173
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
   
 0.412
ABC3437
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.