STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcPConserved hypothetical protein. (402 aa)    
Predicted Functional Partners:
ABC1130
Transcriptional regulator.
  
  
 0.771
rhaM
Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.744
ptsG
ABC component PTS system glucose-specific enzyme II.
   
  
 0.616
ribC
Riboflavin biosynthesis protein RibC; FMN adenylyltransferase; Belongs to the ribF family.
      
 0.567
malP
PTS system, glucose/maltose/N-acetylglucosamine-specific enzyme II, BC component.
   
  
 0.550
ccpA
Transcriptional regulator.
  
  
 0.545
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.541
aroH
Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.
      
 0.524
ABC0724
Sugar ABC transporter substrate-binding protein.
 
     0.463
divIVA
Cell-division initiation protein DivIVA.
      
 0.457
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.