STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1152Oxidoreductase. (428 aa)    
Predicted Functional Partners:
ABC1147
Conserved hypothetical protein.
 
     0.902
ABC1149
Conserved hypothetical protein.
 
     0.860
ABC1146
Sugar ABC transporter permease.
 
     0.843
ABC1148
Xylosidase/arabinosidase; alpha-L-arabinofuranosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.835
uxaA
Altronate hydrolase.
 
     0.818
ABC1150
Conserved hypothetical protein.
       0.812
ABC1151
Conserved hypothetical protein.
 
     0.801
ABC1154
Altronate oxidoreductase.
 
     0.789
lplB
Sugar ABC transporter permease.
 
    0.778
ABC0385
Lactose ABC transporter substrate-binding protein.
 
     0.681
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.