STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC1154Altronate oxidoreductase. (493 aa)    
Predicted Functional Partners:
uxaA
Altronate hydrolase.
 
 0.995
uxaC
Uronate isomerase.
 
 
 0.983
ABC0442
Altronate hydrolase.
 
 0.981
ABC1128
Altronate hydrolase C-terminus.
 
 
 0.979
ABC1127
Altronate hydrolase N-terminus.
 
 
 0.974
uxaB
Altronate oxidoreductase.
  
  
 
0.905
ABC1149
Conserved hypothetical protein.
 
    0.888
ABC1152
Oxidoreductase.
 
     0.789
uxuA
Mannonate dehydratase 1; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.764
ABC2927
A component PTS system mannitol-permease II.
  
  
 0.760
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.