STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1156Sorbitol operon activator. (149 aa)    
Predicted Functional Partners:
ABC1157
C2 component PTS system glucitol/sorbitol-specific enzyme II.
 
  
 0.980
ABC1158
BC component PTS system glucitol/sorbitol-specific enzyme II.
 
  
 0.975
ABC1159
PTS system glucitol-specific enzyme III.
 
  
 0.974
ABC3234
A component PTS system glucitol/sorbitol-specific enzyme II.
 
  
 0.924
ABC3235
BC component PTS system glucitol/sorbitol-specific enzyme II.
 
  
 0.911
ABC3236
C2 component PTS system glucitol/sorbitol-specific enzyme II.
 
  
 0.903
deoR
Transcriptional regulator of sorbose uptake and utilization genes.
 
     0.877
ABC1160
Sorbitol-6-phosphate 2-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.681
ABC3238
NAD(P)-dependent oxidoreductase.
 
     0.453
ABC1154
Altronate oxidoreductase.
       0.444
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.