STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1183Spore coat protein. (213 aa)    
Predicted Functional Partners:
ABC0961
Lipoprotein.
  
  
 0.823
ABC3728
Conserved hypothetical protein.
 
    0.648
ABC1184
Proline-specific permease.
 
    0.621
ABC2899
Hypothetical protein.
 
     0.617
ABC0281
Conserved hypothetical protein.
  
     0.611
ABC1185
Threonine efflux protein.
 
     0.581
ABC0238
Conserved hypothetical protein.
  
    0.540
cotE
Spore coat protein E.
  
  
 0.533
tlp
Conserved hypothetical protein; Belongs to the Tlp family.
  
  
 0.533
ABC1879
Conserved hypothetical protein.
  
    0.520
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.