STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1195Hypothetical protein. (158 aa)    
Predicted Functional Partners:
ABC1194
Hypothetical protein.
       0.584
ABC2123
Multidrug ABC transporter permease.
  
     0.578
ABC3102
Hypothetical protein.
  
     0.558
ABC0679
Conserved hypothetical protein.
  
     0.549
ABC3578
Hypothetical protein.
  
     0.544
ABC1196
Hypothetical protein.
       0.536
ABC1197
Hypothetical protein.
       0.536
ABC1339
Phage-related protein.
  
     0.511
ABC1341
Phage-related tail protein.
 
     0.501
ABC0496
Conserved hypothetical protein.
  
     0.499
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.