ABC1213 protein (Bacillus clausii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ABC1213

Sugar ABC transporter substrate-binding protein. (452 aa)

Predicted Functional Partners:

ABC1214

0.992

ABC1215

0.913

ABC1212

0.808

ABC0386

0.734

ABC0395

0.700

ABC3281

0.683

ABC0398

0.675

ABC0317

0.669

ABC0387

0.645

ABC3775

0.636

Your Current Organism:

Bacillus clausii

NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ABC0317	ABC0387	Sugar ABC transporter permease.	Lactose ABC transporter permease.	0.866
ABC0317	ABC0398	Sugar ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.462
ABC0317	ABC1213	Sugar ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.669
ABC0317	ABC1215	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.851
ABC0386	ABC0387	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.968
ABC0386	ABC0395	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.901
ABC0386	ABC0398	Lactose ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.590
ABC0386	ABC1213	Lactose ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.734
ABC0386	ABC1215	Lactose ABC transporter permease.	Sugar ABC transporter permease.	0.848
ABC0387	ABC0317	Lactose ABC transporter permease.	Sugar ABC transporter permease.	0.866
ABC0387	ABC0386	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.968
ABC0387	ABC0395	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.866
ABC0387	ABC0398	Lactose ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.566
ABC0387	ABC1213	Lactose ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.645
ABC0387	ABC1214	Lactose ABC transporter permease.	Sugar ABC transporter permease.	0.851
ABC0387	ABC3281	Lactose ABC transporter permease.	Sugar ABC transporter permease.	0.866
ABC0387	ABC3775	Lactose ABC transporter permease.	Sugar ABC transporter permease.	0.851
ABC0395	ABC0386	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.901
ABC0395	ABC0387	Lactose ABC transporter permease.	Lactose ABC transporter permease.	0.866
ABC0395	ABC0398	Lactose ABC transporter permease.	Sugar ABC transporter substrate-binding protein.	0.695