STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alsTSodium:alanine symporter. (462 aa)    
Predicted Functional Partners:
mmgD
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.614
citA
Citrate synthase I; Belongs to the citrate synthase family.
   
  
 0.614
citZ
Citrate synthase II; Belongs to the citrate synthase family.
   
  
 0.612
gltT
H+/sodium-glutamate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
  
 0.609
glnQ
Glutamine ABC transporter ATP-binding protein.
  
  
 0.542
pucR
Transcriptional regulator.
      
 0.528
tnrA
Transcriptional regulator.
      
 0.526
glpD
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.508
ABC1260
Stage V sporulation protein B.
       0.506
nrgA
Ammonium transporter.
     
 0.498
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.