STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
treATrehalose-6-phosphate hydrolase. (556 aa)    
Predicted Functional Partners:
treP
BC component PTS system trehalose-specific enzyme II.
 
 
 0.987
ABC1773
A component PTS system glucose-specific enzyme II.
  
 
 0.918
ABC2078
Maltose-6'-phosphate glucosidase.
   
 
 0.906
glvA
Maltose-6'-phosphate glucosidase.
   
 
 0.906
treR
GntR family transcriptional repressor of trehalose operon.
 
  
 0.888
ABC0372
Amino acid transporter.
   
 0.738
ABC0764
Amino acid transporter.
   
 0.738
bglP
A component PTS system glucose-specific enzyme II.
 
  
 0.714
ptsG
ABC component PTS system glucose-specific enzyme II.
  
  
 0.674
ABC3764
BC component PTS system trehalose-specific enzyme II.
 
  
 0.666
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.