Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
treRGntR family transcriptional repressor of trehalose operon. (237 aa)    
Predicted Functional Partners:
treA
Trehalose-6-phosphate hydrolase.
 
  
 0.914
treP
BC component PTS system trehalose-specific enzyme II.
 
  
 0.877
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.679
ABC3764
BC component PTS system trehalose-specific enzyme II.
 
  
 0.673
ABC1453
BC component PTS system sucrose-specific enzyme II.
 
  
 0.672
ABC4039
GntR family transcriptional regulator.
  
    0.599
ABC0978
GntR family transcriptional regulator.
  
    0.566
ABC0475
GntR family transcriptional regulator.
  
    0.551
ABC2722
Transcriptional regulator.
  
    0.548
ABC4038
GntR family transcriptional regulator.
  
    0.544
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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