STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fruRDeoR family transcriptional regulator. (254 aa)    
Predicted Functional Partners:
fruB
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.978
fruA
BC component PTS system fructose-specific enzyme II.
 
  
 0.920
ABC3198
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.724
ABC3574
Conserved hypothetical protein.
 
  
 0.691
ABC0859
BC component PTS system fructose-specific enzyme II.
 
  
 0.665
ABC3197
BC component PTS system fructose-specific enzyme II.
 
  
 0.656
ABC1268
ABC transporter ATP-binding protein.
       0.525
ABC1267
Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
       0.485
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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