Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC0859 | ABC3197 | ABC0859 | ABC3197 | BC component PTS system fructose-specific enzyme II. | BC component PTS system fructose-specific enzyme II. | 0.802 |
ABC0859 | ABC3198 | ABC0859 | ABC3198 | BC component PTS system fructose-specific enzyme II. | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
ABC0859 | ABC3574 | ABC0859 | ABC3574 | BC component PTS system fructose-specific enzyme II. | Conserved hypothetical protein. | 0.995 |
ABC0859 | fruA | ABC0859 | ABC1271 | BC component PTS system fructose-specific enzyme II. | BC component PTS system fructose-specific enzyme II. | 0.792 |
ABC0859 | fruB | ABC0859 | ABC1270 | BC component PTS system fructose-specific enzyme II. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
ABC0859 | fruR | ABC0859 | ABC1269 | BC component PTS system fructose-specific enzyme II. | DeoR family transcriptional regulator. | 0.665 |
ABC1267 | ABC1268 | ABC1267 | ABC1268 | Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | ABC transporter ATP-binding protein. | 0.777 |
ABC1267 | fruA | ABC1267 | ABC1271 | Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | BC component PTS system fructose-specific enzyme II. | 0.535 |
ABC1267 | fruB | ABC1267 | ABC1270 | Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.484 |
ABC1267 | fruR | ABC1267 | ABC1269 | Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | DeoR family transcriptional regulator. | 0.485 |
ABC1268 | ABC1267 | ABC1268 | ABC1267 | ABC transporter ATP-binding protein. | Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily. | 0.777 |
ABC1268 | fruA | ABC1268 | ABC1271 | ABC transporter ATP-binding protein. | BC component PTS system fructose-specific enzyme II. | 0.522 |
ABC1268 | fruB | ABC1268 | ABC1270 | ABC transporter ATP-binding protein. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.524 |
ABC1268 | fruR | ABC1268 | ABC1269 | ABC transporter ATP-binding protein. | DeoR family transcriptional regulator. | 0.525 |
ABC3197 | ABC0859 | ABC3197 | ABC0859 | BC component PTS system fructose-specific enzyme II. | BC component PTS system fructose-specific enzyme II. | 0.802 |
ABC3197 | ABC3198 | ABC3197 | ABC3198 | BC component PTS system fructose-specific enzyme II. | Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
ABC3197 | ABC3574 | ABC3197 | ABC3574 | BC component PTS system fructose-specific enzyme II. | Conserved hypothetical protein. | 0.995 |
ABC3197 | fruA | ABC3197 | ABC1271 | BC component PTS system fructose-specific enzyme II. | BC component PTS system fructose-specific enzyme II. | 0.794 |
ABC3197 | fruB | ABC3197 | ABC1270 | BC component PTS system fructose-specific enzyme II. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
ABC3197 | fruR | ABC3197 | ABC1269 | BC component PTS system fructose-specific enzyme II. | DeoR family transcriptional regulator. | 0.656 |
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