STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1387Epoxide hydrolase 1. (385 aa)    
Predicted Functional Partners:
ABC3436
Conserved hypothetical protein.
  
     0.677
ABC1418
Uncharacterized protein; Probable gene remnant. Similar to the N-terminal region of Amycolatopsis orientalis hypothetical protein CZA382.14c (202 aa) TR:Q9XBD7; locus_tag:ABC1416.
  
     0.578
ABC1384
Translation initiation inhibitor.
 
    0.553
ABC0759
Conserved hypothetical protein.
  
     0.536
ABC1267
Nitric-oxide synthase oxygenase subunit; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.
  
     0.513
ABC0530
Conserved hypothetical protein.
  
    0.482
ABC2828
Hypothetical protein.
  
     0.480
ABC3939
Conserved hypothetical protein.
  
   
 0.473
ABC2408
Conserved hypothetical protein.
  
 0.450
ABC1483
Conserved hypothetical protein.
  
    0.445
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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