STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1389NADH peroxidase; Probable gene remnant. Similar to the N-terminal region of Mesorhizobium loti oxidoreductase of short-chain mlr1899 (278 aa) TR:Q98JK8; locus_tag:ABC1388. (435 aa)    
Predicted Functional Partners:
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
  
 
 0.636
hisI
Bifunctional histidine biosynthesis protein HisJ; phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
  
    0.625
ABC3946
Rieske [2Fe-2S] iron-sulfur protein.
  
 
 0.624
ABC2437
Conserved hypothetical protein.
    
   0.552
ABC1390
Transcriptional regulator.
  
    0.546
ribB
Riboflavin synthase alpha subunit RibB.
   
    0.509
rpmE
50S ribosomal protein L31.
   
    0.509
ABC0901
Conserved hypothetical protein.
  
    0.487
ABC0532
glycine/D-amino acid oxidase.
  
 
 0.481
goxB
Glycine oxidase.
  
 
 0.481
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.