Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABC1405Beta-galactosidase. (684 aa)    
Predicted Functional Partners:
melA
Alpha-galactosidase.
 
  
  0.916
ABC0574
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.914
lacA
Beta-galactosidase.
  
  
 
0.909
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
   
 
  0.901
ABC1132
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.750
ABC1404
Transcriptional regulator.
 
     0.653
ABC3517
Arabinogalactan endo-1,4-beta-galactosidase.
 
  
 0.626
abfA
alpha-L-arabinofuranosidase.
 
  
 0.574
ABC0664
Sugar ABC transporter substrate-binding protein.
 
    0.536
ABC1137
Polysaccharide ABC transporter substrate-binding protein.
 
    0.493
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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