STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABC1406BglG family transcriptional antiterminator. (615 aa)    
Predicted Functional Partners:
ABC1408
Conserved hypothetical protein.
 
     0.955
ABC1409
Conserved hypothetical protein.
 
     0.955
ABC1410
Conserved hypothetical protein.
 
     0.955
ABC1407
Dihydroorotase.
 
     0.950
ABC1411
Conserved hypothetical protein.
 
     0.942
ABC1412
Conserved hypothetical protein.
 
     0.942
ABC1414
Conserved hypothetical protein.
 
     0.935
ABC1413
Selenocysteine synthase [seryl-tRNASer selenium transferase].
 
     0.929
ABC2929
BC component PTS system mannitol-permease II.
 
  
 0.660
ABC2927
A component PTS system mannitol-permease II.
 
  
 0.567
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.