Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABC1407Dihydroorotase. (388 aa)    
Predicted Functional Partners:
ABC1413
Selenocysteine synthase [seryl-tRNASer selenium transferase].
 
  
 0.980
ABC1408
Conserved hypothetical protein.
 
     0.955
ABC1409
Conserved hypothetical protein.
 
     0.955
ABC1410
Conserved hypothetical protein.
 
     0.955
ABC1414
Conserved hypothetical protein.
 
    0.953
ABC1406
BglG family transcriptional antiterminator.
 
     0.950
ABC1411
Conserved hypothetical protein.
 
     0.943
ABC1412
Conserved hypothetical protein.
 
     0.943
pyrDI
Dihydroorotate dehydrogenase catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
     
  0.900
pyrDII
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
     
  0.900
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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