Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABC1044 | ABC1433 | ABC1044 | ABC1433 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.854 |
ABC1044 | desK | ABC1044 | ABC0735 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase. | 0.739 |
ABC1044 | nreB | ABC1044 | ABC0720 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase of nitrate reduction. | 0.759 |
ABC1432 | ABC1433 | ABC1432 | ABC1433 | Two-component sensor histidine kinase. | Two-component response regulator. | 0.964 |
ABC1432 | ABC1436 | ABC1432 | ABC1436 | Two-component sensor histidine kinase. | Multidrug ABC transporter permease. | 0.880 |
ABC1432 | ABC3333 | ABC1432 | ABC3333 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase. | 0.737 |
ABC1432 | ABC3375 | ABC1432 | ABC3375 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase. | 0.723 |
ABC1432 | degS | ABC1432 | ABC3087 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase of extracellular degradative enzyme; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. | 0.691 |
ABC1432 | nreB | ABC1432 | ABC0720 | Two-component sensor histidine kinase. | Two-component sensor histidine kinase of nitrate reduction. | 0.683 |
ABC1433 | ABC1044 | ABC1433 | ABC1044 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.854 |
ABC1433 | ABC1432 | ABC1433 | ABC1432 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.964 |
ABC1433 | ABC1436 | ABC1433 | ABC1436 | Two-component response regulator. | Multidrug ABC transporter permease. | 0.673 |
ABC1433 | ABC2124 | ABC1433 | ABC2124 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.840 |
ABC1433 | ABC3141 | ABC1433 | ABC3141 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.868 |
ABC1433 | ABC3333 | ABC1433 | ABC3333 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.848 |
ABC1433 | ABC3375 | ABC1433 | ABC3375 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.850 |
ABC1433 | degS | ABC1433 | ABC3087 | Two-component response regulator. | Two-component sensor histidine kinase of extracellular degradative enzyme; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. | 0.843 |
ABC1433 | desK | ABC1433 | ABC0735 | Two-component response regulator. | Two-component sensor histidine kinase. | 0.823 |
ABC1433 | nreB | ABC1433 | ABC0720 | Two-component response regulator. | Two-component sensor histidine kinase of nitrate reduction. | 0.846 |
ABC1436 | ABC1432 | ABC1436 | ABC1432 | Multidrug ABC transporter permease. | Two-component sensor histidine kinase. | 0.880 |
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