Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC1434Multidrug ABC transporter ATP-binding protein. (310 aa)    
Predicted Functional Partners:
ABC1435
Multidrug ABC transporter permease.
 
  
 0.953
ABC1436
Multidrug ABC transporter permease.
 
  
 0.952
ABC3186
Multidrug ABC transporter permease.
 
  
 0.923
ABC1047
Multidrug ABC transporter permease.
 
  
 0.811
ABC1048
Multidrug ABC transporter permease.
 
  
 0.789
ABC1432
Two-component sensor histidine kinase.
 
   
 0.783
ABC1433
Two-component response regulator.
 
    0.644
ABC1481
Multidrug ABC transporter permease.
 
  
 0.560
ABC1971
Conserved hypothetical protein.
 
   0.494
ABC1461
Multidrug ABC transporter ATP-binding protein.
  
    0.458
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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