STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1480Multidrug ABC transporter ATP-binding protein. (327 aa)    
Predicted Functional Partners:
ABC1481
Multidrug ABC transporter permease.
  
 0.977
ABC3186
Multidrug ABC transporter permease.
 
  
 0.933
ABC3993
Antimicrobial peptide ABC transporter ATP-binding protein.
 
     0.519
ABC1048
Multidrug ABC transporter permease.
 
  
 0.487
ABC1436
Multidrug ABC transporter permease.
 
  
 0.484
ABC1460
GntR family transcriptional regulator.
  
    0.444
ABC3132
GntR family transcriptional regulator.
  
    0.444
ABC1047
Multidrug ABC transporter permease.
 
  
 0.439
ABC1435
Multidrug ABC transporter permease.
 
  
 0.430
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.