STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1488GntR family transcriptional regulator. (240 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.795
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
  
 0.715
ABC0475
GntR family transcriptional regulator.
  
    0.674
ABC4039
GntR family transcriptional regulator.
  
    0.647
ABC4038
GntR family transcriptional regulator.
  
    0.639
ABC0472
GntR family transcriptional regulator.
  
    0.610
ABC0978
GntR family transcriptional regulator.
  
    0.596
ABC2722
Transcriptional regulator.
  
    0.594
ABC1486
GntR family transcriptional regulator.
 
    
0.560
argH1
Argininosuccinate lyase.
       0.450
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.