STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1518Conserved hypothetical protein. (379 aa)    
Predicted Functional Partners:
ABC1519
Conserved hypothetical protein; Belongs to the UPF0342 family.
 
     0.749
ABC1520
HAD superfamily hydrolase.
       0.711
ABC1517
Conserved hypothetical protein.
       0.686
ABC2936
Conserved hypothetical protein; Belongs to the UPF0349 family.
  
     0.680
ABC1018
Conserved hypothetical protein.
  
     0.565
ABC1305
Conserved hypothetical protein.
  
     0.508
ABC1516
Conserved hypothetical protein.
       0.456
ABC1515
Regulator of polyketide synthase expression.
       0.429
ABC3057
Conserved hypothetical protein.
  
     0.412
hemX
Negative effector of the concentration of HemA.
  
     0.408
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.