Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hprTranscriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation. (191 aa)    
Predicted Functional Partners:
ABC1530
Conserved hypothetical protein.
 
   
 0.771
ABC2638
Conserved hypothetical protein.
 
  
 0.765
ABC3885
Conserved hypothetical protein.
  
     0.758
ABC2521
Conserved hypothetical protein; Belongs to the UPF0738 family.
  
     0.743
ABC1600
Hypothetical protein.
  
     0.730
ABC1906
Conserved hypothetical protein.
  
     0.730
ABC2728
Conserved hypothetical protein.
  
     0.725
ABC2051
Conserved hypothetical protein.
  
     0.712
ABC1471
Conserved hypothetical protein.
  
     0.708
ABC2886
Conserved hypothetical protein.
  
     0.708
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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