STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1530Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.817
hpr
Transcriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation.
 
   
 0.771
ABC1532
Hit family cell-cycle regulation histidine triad.
  
    0.597
ABC2166
Site-specific recombinase.
  
    0.584
ABC2408
Conserved hypothetical protein.
  
     0.578
ABC0211
GNAT family acetyltransferase.
  
     0.569
ABC0271
Conserved hypothetical protein.
  
    0.507
ABC2399
Conserved hypothetical protein.
  
     0.460
ABC2529
Conserved hypothetical protein.
  
    0.457
ABC2573
N-dimethylarginine dimethylaminohydrolase.
  
    0.455
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.