STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1530Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.799
hpr
Transcriptional repressor of sporulation and extracellular protein; Negative regulator of protease production and sporulation.
 
     0.687
ABC1532
Hit family cell-cycle regulation histidine triad.
  
    0.594
ABC2166
Site-specific recombinase.
  
    0.583
ABC2408
Conserved hypothetical protein.
  
     0.578
ABC0211
GNAT family acetyltransferase.
  
    0.577
ABC2767
General stress protein.
 
  
 0.555
ABC2529
Conserved hypothetical protein.
  
    0.531
ABC0271
Conserved hypothetical protein.
  
    0.507
ABC2399
Conserved hypothetical protein.
  
     0.460
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.