STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsBMultidrug ABC transporter permease. (408 aa)    
Predicted Functional Partners:
ecsA
Multidrug ABC transporter ATP-binding protein.
 
  
 0.951
ABC1535
Conserved hypothetical protein.
 
  
 0.840
ABC2767
General stress protein.
  
     0.714
ABC2626
Stage VI sporulation protein D.
  
     0.692
ABC2381
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
   
 0.676
ABC2741
Adenine-specific methyltransferase.
 
     0.673
mecA-2
Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.
  
     0.668
ABC2948
Conserved hypothetical protein.
  
     0.660
ABC0820
SprT family metallopeptidase; Belongs to the SprT family.
  
     0.655
ABC4097
Conserved hypothetical protein.
  
     0.644
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.