STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1553Forespore regulator of the sigma-K checkpoint. (172 aa)    
Predicted Functional Partners:
ABC1696
Conserved hypothetical protein.
  
     0.752
ABC2626
Stage VI sporulation protein D.
  
   
 0.736
ABC2384
Conserved hypothetical protein.
  
     0.731
ABC1719
Conserved hypothetical protein.
  
     0.728
ABC1312
Conserved hypothetical protein.
  
     0.719
ABC1716
Major facilitator (MFS) superfamily protein.
  
     0.717
ABC0010
Conserved hypothetical protein.
  
     0.712
ABC2943
Conserved hypothetical protein.
  
     0.712
ABC1291
Conserved hypothetical protein.
  
     0.708
ABC1911
Conserved hypothetical protein.
  
     0.683
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.