STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoVBStage V sporulation protein B. (516 aa)    
Predicted Functional Partners:
cotE
Spore coat protein E.
  
  
 0.812
spoIIE
Serine phosphatase stage II sporulation protein E.
  
  
 0.722
spoIIP
Stage II sporulation protein P; Septal wall dissolution protein.
  
   
 0.722
ABC2376
Conserved hypothetical protein.
  
  
 0.719
spoIVFB
Stage IV sporulation protein FB.
  
  
 0.709
spoVFA
Dipicolinate synthase subunit A.
  
   
 0.707
ABC0097
Conserved hypothetical protein.
 
  
 0.702
ABC0806
Conserved hypothetical protein.
  
     0.700
ABC2497
Conserved hypothetical protein.
  
     0.683
spoIIIAE
Stage III sporulation protein AE.
  
  
 0.680
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.