STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1574NADH-dependent dehydrogenase. (337 aa)    
Predicted Functional Partners:
ABC1573
Trehalose utilization protein.
 
    0.904
ABC0795
Sugar phosphate isomerases/epimerase.
    0.814
ABC3468
Sugar phosphate isomerases/epimerase.
    0.793
ABC3472
Oxidoreductase.
  
     0.769
ABC1572
LacI family transcriptional regulator.
  
    0.653
ABC3279
Conserved hypothetical protein.
 
    0.634
ABC0797
Sugar phosphate isomerases/epimerase.
 
    0.616
ABC3284
Sugar phosphate isomerases/epimerase.
 
    0.602
ABC0364
Hypothetical protein.
 
    0.599
iolE
Myo-inositol catabolism protein IolE; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).
 
  
 0.543
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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