STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABC1606Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (276 aa)    
Predicted Functional Partners:
ABC1608
Oligopeptide ABC transporter permease.
  
 0.934
ABC4064
Oligopeptide ABC transporter permease.
  
 0.875
dppC
Dipeptide ABC transporter permease.
  
 0.869
ABC0566
Oligopeptide ABC transporter permease.
  
 0.861
ABC1609
Oligopeptide ABC transporter permease.
 
 0.860
ABC0032
Oligopeptide ABC transporter permease.
  
 0.851
ABC3659
Oligopeptide ABC transporter permease.
  
 0.843
ABC1605
Oligopeptide ABC transporter substrate-binding protein.
 
    0.831
ABC1242
Oligopeptide ABC transporter permease.
  
 0.819
ABC2412
Oligopeptide ABC transporter permease.
  
 0.789
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.