Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABC1614Short-chain fatty acids transporter. (468 aa)    
Predicted Functional Partners:
ABC1615
N-acyl-L-amino acid amidohydrolase; Belongs to the peptidase M20A family.
 
    0.621
ABC1613
Lipoate-protein ligase.
       0.499
ABC0018
NhaC family Na+:H+ antiporter.
 
     0.451
nhaC
Na+:H+ antiporter.
 
     0.436
ABC1616
Sodium-dependent transporter.
  
    0.408
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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