STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nasDAssimilatory nitrite reductase [NAD(P)H] large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (813 aa)    
Predicted Functional Partners:
nasE
Assimilatory nitrite reductase [NAD(P)H] small subunit.
 
 0.999
nasC
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.991
narK
Nitrate/nitrite transporter.
 
  
 0.981
nasB
Assimilatory nitrate reductase electron transfer subunit.
 
  
 
0.973
narG
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.971
ABC0722
Nitrate/nitrite transporter.
 
 
 0.958
narH
Respiratory nitrate reductase beta chain.
  
 
 0.943
narI
Respiratory nitrate reductase gamma chain.
  
 
 0.934
glnA
Glutamine synthetase.
    
 0.915
ABC3940
Glutamine synthetase.
    
 0.915
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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