Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
opuDGlycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family. (553 aa)    
Predicted Functional Partners:
ctc
Ribosomal protein L25 family general stress protein; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.
      
 0.594
opuAA
Glycine betaine ABC transporter ATP-binding protein.
      
 0.593
opuCC
Proline/glycine betaine ABC transporter substrate-binding protein.
     
 0.591
opuAB
Glycine betaine ABC transporter permease.
      
 0.589
katX
Catalase; Belongs to the catalase family.
      
 0.567
bmrU
Multidrug resistance protein.
     
 0.553
gbsA
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.551
ohrB
Organic hydroperoxide resistance protein.
      
 0.541
gsiB
General stress protein B.
      
 0.541
gbsB
Alcohol dehydrogenase.
   
  
 0.441
Your Current Organism:
Bacillus clausii
NCBI taxonomy Id: 66692
Other names: B. clausii KSM-K16, Bacillus clausii KSM-K16, Bacillus sp. (strain KSM-K16), Bacillus sp. KSM-K16
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